polyTEM.crystal_peaks.vector_graph_utils

Functions

create_edges_from_simulation(graph, ...)	creates edges with edge attribute probability :param graph: networkx Graph to modify :param prob_mat: sparse object, Probability Adjacency Matrix with shape (N, graph.order()) :param node_index: the Node index value that corresponds to the first row in prob_mat
create_nodes_from_vectorfield(vector_field)	param vector_field: numpy array from CrystalStack3D vector field
load(savefile)
nonintersecting_paths(paths)	Find all nonintersecting paths given paths dictionary, where paths is the output of nx.shortest_path(graph,source)
save(graph, savefile)
sort_largest_subgraph(graph)	Return list of subgraphs based on graph size