polyTEM.tomography.alignment.shift_markers¶

polyTEM.tomography.alignment.shift_markers(x_coords, y_coords, rot_angles, dx, dy)¶

Use approximate solution from find_alignment_errors to align markers

Parameters:

x_coords – numpy array shape (num_images,num_particles)
y_coords – numpy array shape (num_images,num_particles,)
rot_angles – numpy array shape (num_images,) containing rotation alignment, in radians
dx – numpy array shape (num_images,) containing shift in x
dy – numpy array shape (num_images,) containing shift in y

Returns:

numpy array shape (num_images,num_particles,2) containing

Return type:

shifted_coords